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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rgn, regucalcin
Sequence ID:NM_009060
Entrez Gene ID:19733
Ensembl ID:ENSMUSG00000023070

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1.3|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 20549786 - 20562087

NM_009060 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1562012694320126998
572352012748820127666
2364182012944520129627
4196342013463720134852
6357662013648020136611
7679212013710220137256
92215742013856020139212

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4210374Full LengthBC012710regucalcin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033086  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009060 NP_033086 Q64374 EC 3.1.1.17 SGL

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U28937 AAC52721 Q64374 EC 3.1.1.17
BC012710 AAH12710 Q64374 EC 3.1.1.17
D86217 BAA13046 Q64374 EC 3.1.1.17
AK146465 BAE27192 Q64374 EC 3.1.1.17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rgn NP_033086 R.norvegicus Rgn 25106   NP_113734 94
H.sapiens RGN 9104 Gene Info NP_004674 89
D.melanogaster regucalcin 32165   NP_572775 38
D.melanogaster smp-30 41786   NP_731942 37
S.cerevisiae YBR053C 852342   NP_009609 32
N.crassa NCU00326 3873935   XP_957797 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)