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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clps, colipase, pancreatic
Sequence ID:NM_025469
Entrez Gene ID:109791
Ensembl ID:ENSMUSG00000024225

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17|17 B1

Chromosomal Position (from UCSC)

Chromosomal Position:17: 28558234 - 28560701

NM_025469 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12272869515828695384
2283502869570528695827
3514942869751528697658

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6399295Full LengthBC042935colipase, pancreatic

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079745  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025469 NP_079745 Q9CQC2 Colipase
Colipase_C

Related Sequences

 
mRNAGenPeptSwissProt
BC042935 AAH42935 Q9CQC2
AF414676 AAL40730 Q9CQC2
AF414677 AAL40731 Q9CQC2
AK008635 BAB25796 Q9CQC2
AK008815 BAB25909 Q9CQC2
AK008834 BAB25918 Q9CQC2
AK008839 BAB25921 Q9CQC2
AK008874 BAB25944 Q9CQC2
AK008879 BAB25947 Q9CQC2
AK019005 BAB31505 Q9D2R7
AK019047 BAB31524 Q9CQC2
AK028141 BAC25769 Q9CQC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clps NP_079745 R.norvegicus Clps 25680   NP_037271 94
H.sapiens CLPS 1208 Gene Info NP_001823 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)