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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sstr3, somatostatin receptor 3
Sequence ID:NM_009218
Entrez Gene ID:20607
Ensembl ID:ENSMUSG00000044933

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15 46.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 78537014 - 78544345

NM_009218 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
135717836744478371014
357237187837423278374378
371939287837456578374774

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860689Full LengthBC137670somatostatin receptor 3
40129766Full LengthBC120843somatostatin receptor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033244  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009218 NP_033244 P30935 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC120843 AAI20844 Q0VB04
BC137670 AAI37671 Q0VB04
AK136904 BAE23164 P30935

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sstr3 NP_033244 R.norvegicus Sstr3 171044   NP_598206 97
H.sapiens SSTR3 6753 Gene Info NP_001042 87
C.elegans uvt-6 180643   NP_001041258 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)