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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pnpt1, Polyribonucleotide nucleotidyltransferase 1
Sequence ID:NM_027869
Entrez Gene ID:71701
Ensembl ID:ENSMUSG00000020464

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 A4

Chromosomal Position (from UCSC)

Chromosomal Position:11: 29130757 - 29161672

 Exon Info From UCSC:
NM_027869

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498934Full LengthBC055826polyribonucleotide nucleotidyltransferase 1
3584459IncompleteBC027228polyribonucleotide nucleotidyltransferase 1
4952783IncompleteBC049283polyribonucleotide nucleotidyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082145  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027869 NP_082145 Q8K1R3 EC 2.7.7.8 KH_1
S1
RNase_PH
RNase_PH_C
PNPase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC027228 AAH27228 Q8K1R3 EC 2.7.7.8
BC049283 AAH49283 Q8K1R3 EC 2.7.7.8
BC055826 AAH55826 Q8K1R3 EC 2.7.7.8
AF465249 AAO33354 Q8K1R3 EC 2.7.7.8
AK144151 BAE25732 Q3UNL5  
AK149419 BAE28862 Q8K1R3 EC 2.7.7.8
AK161833 BAE36595 Q3TST0  
AK165566 BAE38260 Q3TN29  
AJ507387 CAD45436 Q8K1R3 EC 2.7.7.8
XM_003689261 XP_003689309    
XM_003945895 XP_003945944    
XM_003945896 XP_003945945    
XM_003945897 XP_003945946    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pnpt1 NP_082145 R.norvegicus Pnpt1 360992   NP_001135843 96
H.sapiens PNPT1 87178 Gene Info NP_149100 91
A.gambiae AgaP_AGAP010791 1278871   XP_318517 57
D.melanogaster CG11337 43710   NP_001163783 56
C.elegans BE0003N10.1 175269   NP_497324 43
A.thaliana AT5G14580 831309   NP_196962 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)