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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lrrc16a, leucine rich repeat containing 16A
Sequence ID:NM_177807
NM_026825
Entrez Gene ID:68732
Ensembl ID:ENSMUSG00000021338

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.2|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 24012483 - 24022556


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068157Full LengthBC167257leucine rich repeat containing 16A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081101  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026825 NP_081101 Q6EDY6 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC012229 AAH12229 Q6EDY6
BC167257 AAI67257 Q6EDY6
AY437876 AAR96060 Q6EDY6
AK004138 BAB23187 Q9CTA1
AK043591 BAC31591 Q6EDY6
AK051570 BAC34678 Q6EDY6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrc16a NP_081101 R.norvegicus Lrrc16a 306941   XP_225336 96
H.sapiens LRRC16A 55604 Gene Info NP_060110 90
A.gambiae AgaP_AGAP004841 1275125   XP_314353 42
D.melanogaster CG1399 35715   NP_001163075 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)