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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ttr, transthyretin
Sequence ID:NM_013697
Entrez Gene ID:22139
Ensembl ID:ENSMUSG00000061808

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 A2|18 7.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 20665412 - 20674321

NM_013697 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12582082375020824007
2593892082495620825086
3905252082847920828614
52612192083213120832824

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4192268Full LengthBC024702transthyretin
6749152Full LengthBC086926transthyretin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038725  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013697 NP_038725 P07309
Q5M9K1
Transthyretin

Related Sequences

 
mRNAGenPeptSwissProt
BC024702 AAH24702 P07309
Q5M9K1
BC086926 AAH86926 P07309
Q5M9K1
D89076 BAA13757 P07309
Q5M9K1
AK014454 BAB29362 Q9D6A4
AK018701 BAB31352 P07309
Q5M9K1
AK050155 BAC34098 P07309
Q5M9K1
AK075588 BAC35839 P07309
Q5M9K1
X03351 CAA27057 P07309
Q5M9K1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ttr NP_038725 R.norvegicus Ttr 24856   NP_036813 93
H.sapiens TTR 7276 Gene Info NP_000362 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)