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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sarm1, sterile alpha and HEAT/Armadillo motif containing 1
Sequence ID:NM_001168521
NM_172795
Entrez Gene ID:237868
Ensembl ID:ENSMUSG00000050132

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11 45.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 78473212 - 78483798

 Exon Info From UCSC:
NM_001168521
NM_172795

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6834056Full LengthBC058534sterile alpha and HEAT/Armadillo motif containing 1
6849138Full LengthBC080850sterile alpha and HEAT/Armadillo motif containing 1
5695587IncompleteBC052098sterile alpha and HEAT/Armadillo motif containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766383  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168521 NP_001161993    
NM_172795 NP_766383 Q6PDS3 SAM_2

Related Sequences

 
mRNAGenPeptSwissProt
BC052098 AAH52098 A0PJL3
BC058534 AAH58534 Q6PDS3
BC080850 AAH80850 Q6PDS3
AY444167 AAR17521 Q6PDS3
AK044113 BAC31784 Q6PDS3
AK172964 BAD32242 Q6PDS3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sarm1 NP_001161993 R.norvegicus Sarm1 287545   NP_001099287 98
H.sapiens SARM1 23098 Gene Info NP_055892 94
D.melanogaster Ect4 38895   NP_001097544 46
A.gambiae AgaP_AGAP005901 1276568   XP_001688747 46
C.elegans tir-1 175502   NP_001021251 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)