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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Txnrd1, thioredoxin reductase 1
Sequence ID:NM_001042513
NM_001042514
NM_001042523
NM_015762
Entrez Gene ID:50493
Ensembl ID:ENSMUSG00000020250

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 82859178 - 82897712

 Exon Info From UCSC:
NM_001042513
NM_001042514
NM_001042523
NM_015762

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5059831Full LengthBC037643thioredoxin reductase 1

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001042513 NP_001035978      
NM_001042514 NP_001035979      
NM_001042523 NP_001035988 Q9JMH6 EC 1.8.1.9  
NM_015762 NP_056577      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC037643 AAH37643 Q9JMH6 EC 1.8.1.9
AF333036 AAK01140 Q9JMH6 EC 1.8.1.9
AB027565 BAA86985 Q9JMH6 EC 1.8.1.9
AK011902 BAB27905 Q9JMH6 EC 1.8.1.9
AK146125 BAE26918 Q9JMH6 EC 1.8.1.9
AK149625 BAE28994 Q9JMH6 EC 1.8.1.9
AK168356 BAE40292 Q9JMH6 EC 1.8.1.9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Txnrd1 NP_001035988 R.norvegicus Txnrd1 58819   NP_113802 97
H.sapiens TXNRD1 7296 Gene Info NP_001087240 91
C.elegans trxr-1 177466   NP_501085 59
A.thaliana GR1 822003   NP_001030756 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)