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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cst9, cystatin 9
Sequence ID:NM_009979
Entrez Gene ID:13013
Ensembl ID:ENSMUSG00000027445

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 H1

Chromosomal Position (from UCSC)

Chromosomal Position:2: 148835171 - 148838735

NM_009979 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1286148660882148661167
287400148662409148662522
401686148664187148664472

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6772736Full LengthBC048486cystatin 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034109  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009979 NP_034109 Q9Z0H6 Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
BC048486 AAH48486 Q9Z0H6
AB017157 BAA37089 Q9Z0H6
AK006429 BAB24584 Q9Z0H6
Y18243 CAA77090 Q9Z0H6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cst9 NP_034109 R.norvegicus Cst9l 362231   NP_001102067 83
H.sapiens CST9L 128821 Gene Info NP_542177 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)