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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Efnb2, ephrin B2
Sequence ID:NM_010111
Entrez Gene ID:13642
Ensembl ID:ENSMUSG00000001300

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A1.1|8 2.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 8618612 - 8661239

NM_010111 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1353886174388620975
3539365286223308622443
3653374586231478623239
3746402986392058639488
4030431986604838660772

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6827408Full LengthBC057009ephrin B2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034241  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010111 NP_034241 Q4FJM3
P52800
Ephrin

Related Sequences

 
mRNAGenPeptSwissProt
U30244 AAA82934 P52800
U16819 AAA99708 P52800
L38847 AAC42052 Q4FJM3
P52800
BC057009 AAH57009 Q4FJM3
P52800
AK132512 BAE21211 Q3V1E0
AK132845 BAE21388 Q4FJM3
P52800
AK134108 BAE22016 Q4FJM3
P52800
AK142203 BAE24974 Q4FJM3
P52800
AK142283 BAE25008 Q4FJM3
P52800
AK143059 BAE25260 Q4FJM3
P52800
CT010381 CAJ18588 Q4FJM3
P52800

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Efnb2 NP_034241 R.norvegicus Efnb2 306636   NP_001100798 99
H.sapiens EFNB2 1948 Gene Info NP_004084 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)