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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hltf, helicase-like transcription factor
Sequence ID:NM_009210
NM_144959
Entrez Gene ID:20585
Ensembl ID:ENSMUSG00000002428

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 A2|3 12.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 20057987 - 20116722

 Exon Info From UCSC:
NM_009210
NM_144959

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6408672Full LengthBC057116helicase-like transcription factor
6408672Full LengthBC059240helicase-like transcription factor
1363744IncompleteBC039796helicase-like transcription factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033236  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009210 NP_033236 Q6PCN7 SNF2_N
Helicase_C
NM_144959 NP_659208    

Related Sequences

 
mRNAGenPeptSwissProt
AF010600 AAB63915 Q6PCN7
BC039796 AAH39796 Q6PCN7
BC057116 AAH57116 Q6PCN7
BC059240 AAH59240 Q6PCN7
AK141235 BAE24607 Q3URT1
AK142961 BAE25232 Q3UQ12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hltf NP_033236 R.norvegicus Hltf 295568   NP_001099948 90
H.sapiens HLTF 6596 Gene Info NP_620636 84
A.thaliana AT5G05130 830395   NP_196132 42
N.crassa NCU07975 3878825   XP_962645 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)