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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ttc27, Tetratricopeptide repeat domain 27
Sequence ID:NM_152817
Entrez Gene ID:74196
Ensembl ID:ENSMUSG00000024078

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E2|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 74717750 - 74863570

 Exon Info From UCSC:
NM_152817

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503335Full LengthBC021912tetratricopeptide repeat domain 27

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_690030  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152817 NP_690030 Q8CD92 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
BC021912 AAH21912 Q8CD92
AK030942 BAC27189 Q8CD92
AK049324 BAC33683 Q8CD92
AK168138 BAE40106 Q8CD92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ttc27 NP_690030 R.norvegicus Ttc27 298782   NP_001100176 95
H.sapiens TTC27 55622 Gene Info NP_060205 85
C.elegans T20B12.1 176055   NP_498636 36
D.melanogaster CG5290 39998   NP_649026 33
S.pombe SPAC19B12.01 2543591   NP_594764 33
A.gambiae AgaP_AGAP006358 1276965   XP_316379 30
N.crassa NCU09658 3874862   XP_958724 30
S.cerevisiae EMW1 855403   NP_014086 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)