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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tcn2, transcobalamin 2
Sequence ID:NM_001130458
NM_001130459
NM_015749
Entrez Gene ID:21452
Ensembl ID:ENSMUSG00000020432

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A1|11 3.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 3917191 - 3931583

 Exon Info From UCSC:
NM_001130458
NM_001130459
NM_015749

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601531Full LengthBC003720transcobalamin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056564  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130458 NP_001123930    
NM_001130459 NP_001123931    
NM_015749 NP_056564 O88968 Cobalamin_bind

Related Sequences

 
mRNAGenPeptSwissProt
AF090686 AAC61868 O88968
BC003720 AAH03720 O88968
AK133707 BAE21792 O88968
AK143761 BAE25528 O88968
AK147176 BAE27739 O88968
AK161618 BAE36496 O88968
AK170401 BAE41770 O88968

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tcn2 NP_001123930 R.norvegicus Tcn2 64365   NP_071979 88
H.sapiens TCN2 6948 Gene Info NP_000346 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)