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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gipc1, GIPC PDZ domain containing family, member 1
Sequence ID:NM_018771
Entrez Gene ID:67903
Ensembl ID:ENSMUSG00000019433

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 C3

Chromosomal Position (from UCSC)

Chromosomal Position:8: 83660964 - 83664789

NM_018771 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1608617657686176635
613828618485786185178
3835688618585386186038
5697498618613386186313
7508628618694786187059
8639448618781886187899
94516168618801686188687

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2811749Full LengthBC003490GIPC PDZ domain containing family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061241  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018771 NP_061241 Q9Z0G0 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
AF089818 AAC67550 Q9Z0G0
AF061263 AAC72311 Q9Z0G0
AF104358 AAD12262 Q9Z0G0
BC003490 AAH03490 Q9Z0G0
AK086506 BAC39680 Q9Z0G0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gipc1 NP_061241 R.norvegicus Gipc1 83823   NP_445793 99
H.sapiens GIPC1 10755 Gene Info NP_005707 96
C.elegans C35D10.2 175649   NP_498017 40
C.elegans F44D12.4 177865   NP_501810 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)