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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Snai1, snail homolog 1 (Drosophila)
Sequence ID:NM_011427
Entrez Gene ID:20613
Ensembl ID:ENSMUSG00000042821

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H3|2 97.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 167538203 - 167542808

NM_011427 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1145167363726167363870
146673167364170167364697
6741586167367398167368310

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5121591Full LengthBC034857snail homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035557  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011427 NP_035557 Q4FK48
Q02085
zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
M95604 AAA03481 Q4FK48
Q02085
BC034857 AAH34857 Q4FK48
Q02085
X67253 CAA47675 Q02085
CT010204 CAJ18412 Q4FK48
Q02085
CT010370 CAJ18577 Q4FK48
Q02085

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snai1 NP_035557 R.norvegicus Snai1 116490   NP_446257 98
H.sapiens SNAI1 6615 Gene Info NP_005976 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta