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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Trip12, thyroid hormone receptor interactor 12
Sequence ID:NM_133975
Entrez Gene ID:14897
Ensembl ID:ENSMUSG00000026219

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 F|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 84737007 - 84738815

 Exon Info From UCSC:
NM_133975

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4507222IncompleteBC034113thyroid hormone receptor interactor 12

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133975 NP_598736 G5E870  

Related Sequences

 
mRNAGenPeptSwissProt
AF033665 AAC32044 O88380
BC034113 AAH34113 G5E870
AK034814 BAC28839 G5E870
AK134397 BAE22126 G5E870
AK158807 BAE34675 G5E870
AK164719 BAE37889 Q3TP48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trip12 NP_598736 R.norvegicus Trip12 316575   NP_001026829 99
H.sapiens TRIP12 9320 Gene Info NP_004229 98
A.thaliana KAK 830017   NP_849567 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)