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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clca2, chloride channel calcium activated 2
Sequence ID:NM_030601
Entrez Gene ID:80797
Ensembl ID:ENSMUSG00000028262

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 H2|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 144797179 - 144819470

 Exon Info From UCSC:
NM_030601

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3583804Full LengthBC008147chloride channel calcium activated 2
4488038IncompleteBC039166chloride channel calcium activated 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_085104  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030601 NP_085104 Q9EQR4 VWA
CLCA_N

Related Sequences

 
mRNAGenPeptSwissProt
AF108501 AAF12731 Q9R070
AF115852 AAG47626 Q9EQR4
BC008147 AAH08147 Q9EQR4
AK042314 BAC31221 Q8C9E1
AK132498 BAE21205 Q9EQR4
AK134192 BAE22045 Q3UZ16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clca2 NP_085104 M.musculus Clca1 12722 Gene Info NP_034029 95
R.norvegicus Clca2 362052   NP_001013220 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)