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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc30a8, solute carrier family 30 (zinc transporter), member 8
Sequence ID:NM_172816
Entrez Gene ID:239436
Ensembl ID:ENSMUSG00000022315

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 C|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 52295652 - 52335798

NM_172816 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14045212710752127510
4056015213800452138200
6027485214882952148975
7499025215325352153406
90310535215711452157264
105411595216312152163226
116012945216507552165209
129519065216667652167287

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40105617Full LengthBC117544solute carrier family 30 (zinc transporter), member 8
40105622Full LengthBC118521solute carrier family 30 (zinc transporter), member 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766404  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172816 NP_766404 Q8BGG0 Cation_efflux

Related Sequences

 
mRNAGenPeptSwissProt
BC117544 AAI17545 Q8BGG0
BC118521 AAI18522 Q8BGG0
AK050482 BAC34281 Q8BGG0
AK050494 BAC34289 Q8BGG0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc30a8 NP_766404 R.norvegicus Slc30a8 299903   NP_001124010 92
H.sapiens SLC30A8 169026 Gene Info NP_776250 81
A.thaliana ZAT 819293   NP_850459 38
P.falciparum PF07_0065 2655109   XP_001349062 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)