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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Thbs4, thrombospondin 4
Sequence ID:NM_011582
Entrez Gene ID:21828
Ensembl ID:ENSMUSG00000021702

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C3|13 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 92751585 - 92794758

 Exon Info From UCSC:
NM_011582

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862436Full LengthBC139414thrombospondin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035712  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011582 NP_035712 Q9Z1T2 EGF
TSP_3
TSP_C
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
AF102887 AAC73003 Q9Z1T2
BC139414 AAI39415 B2RTL6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Thbs4 NP_035712 R.norvegicus Thbs4 29220   XP_342173 97
H.sapiens THBS4 7060 Gene Info NP_003239 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)