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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Abcc5, ATP-binding cassette, sub-family C (CFTR/MRP), member 5
Sequence ID:NM_013790
NM_176839
Entrez Gene ID:27416
Ensembl ID:ENSMUSG00000022822

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A3|16 14.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 20332257 - 20338903

 Exon Info From UCSC:
NM_013790
NM_176839

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6839816Full LengthBC090629ATP-binding cassette, sub-family C (CFTR/MRP), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038818  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013790 NP_038818 Q9R1X5 ABC_tran
ABC_membrane
NM_176839 NP_789809 Q6P8Q2  

Related Sequences

 
mRNAGenPeptSwissProt
AF213387 AAF31427 Q9JL43
BC042581 AAH42581 Q8CFP9
BC061132 AAH61132 Q6P8Q2
BC090629 AAH90629 Q9R1X5
AB012090 BAA32782 Q9R1X5
AB019003 BAA76609 Q9R1X5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abcc5 NP_038818 R.norvegicus Abcc5 116721   NP_446376 98
H.sapiens ABCC5 10057 Gene Info NP_005679 95
C.elegans mrp-5 181587   NP_510479 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)