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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Apod, apolipoprotein D
Sequence ID:NM_007470
Entrez Gene ID:11815
Ensembl ID:ENSMUSG00000022548

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B2|16 21.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 31296650 - 31314596

NM_007470 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40131210Full LengthBC145907apolipoprotein D
40131212Full LengthBC145909apolipoprotein D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031496  

Protein Infomation

NM_007470 NP_031496 P51910 Lipocalin_2

Related Sequences

BC145907 AAI45908 P51910
BC145909 AAI45910 P51910
AK135046 BAE22397 P51910
AK157917 BAE34262 P51910
AK158118 BAE34364 P51910
AK158405 BAE34491 P51910
AK160729 BAE35974 P51910
AK162392 BAE36889 P51910
X82648 CAA57974 P51910

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Apod NP_031496 R.norvegicus Apod 25239   NP_036909 89
H.sapiens APOD 347 Gene Info NP_001638 73
A.gambiae AgaP_AGAP009281 1280247   XP_320076 44
D.melanogaster NLaz 33324   NP_787960 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)