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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnfsf15, tumor necrosis factor (ligand) superfamily, member 15
Sequence ID:NM_177371
Entrez Gene ID:326623
Ensembl ID:ENSMUSG00000050395

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 63729588 - 63745030

NM_177371 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
154416338563663391076
544254806339436163394399
548155236339528763395329
552458286340584263406146

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861226Full LengthBC138207tumor necrosis factor (ligand) superfamily, member 15
8861227Full LengthBC138208tumor necrosis factor (ligand) superfamily, member 15
30740802Full LengthBC096494tumor necrosis factor (ligand) superfamily, member 15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796345  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177371 NP_796345   TNF

Related Sequences

 
mRNAGenPeptSwissProt
BC096494 AAH96494 Q5UBV8
BC138207 AAI38208 B2RR33
BC138208 AAI38209 B2RR33
AF520786 AAM77367 Q5UBV8
AY764130 AAV33431 Q5UBV8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnfsf15 NP_796345 R.norvegicus Tnfsf15 252878   NP_665708 85
H.sapiens TNFSF15 9966 Gene Info NP_005109 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)