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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hrnr, Hornerin
Sequence ID:NM_133698
Entrez Gene ID:68723
Ensembl ID:ENSMUSG00000041991

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 93332743 - 93333567

NM_133698 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1519312367093123720
522119312447693124635
21269149312651693133218
6915106569313375093137491

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40087781Full LengthBC118008hornerin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598459  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133698 NP_598459 Q8VHD8 S_100

Related Sequences

 
mRNAGenPeptSwissProt
BC118008 AAI18009 Q148R7
AY027660 AAK15791 Q8VHD8
AK041026 BAC30787 Q8BLX1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hrnr NP_598459 H.sapiens HRNR 388697 Gene Info NP_001009931 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)