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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hoxc13, homeobox C13
Sequence ID:NM_010464
Entrez Gene ID:15422
Ensembl ID:ENSMUSG00000001655

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F3|15 57.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 102921130 - 102928814

NM_010464 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1787102751561102752347
7882433102757599102759244

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063856Full LengthBC160208homeo box C13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034594  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010464 NP_034594 P50207 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC160208 AAI60208  
AF193796 AAL09298 P50207
AY349616 AAQ54690 P50207

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hoxc13 NP_034594 R.norvegicus Hoxc13 315337   XP_235695 100
H.sapiens HOXC13 3229 Gene Info NP_059106 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)