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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5
Sequence ID:NM_001146013
NM_148931
Entrez Gene ID:104245
Ensembl ID:ENSMUSG00000039728

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B5|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 49910352 - 49959455

 Exon Info From UCSC:
NM_001146013
NM_148931

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861144Full LengthBC138125solute carrier family 6 (neurotransmitter transporter, glycine), member 5
8861145Full LengthBC138126solute carrier family 6 (neurotransmitter transporter, glycine), member 5
9007308Full LengthBC157997solute carrier family 6 (neurotransmitter transporter, glycine), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_683733  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146013 NP_001139485    
NM_148931 NP_683733   SNF

Related Sequences

 
mRNAGenPeptSwissProt
BC138125 AAI38126 B2RQX9
BC138126 AAI38127 B2RQX9
BC157997 AAI57998 B2RXV9
AF411042 AAL17054 Q761V0
AY147186 AAN11408 Q761V0
AB118159 BAD16781 Q761V0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc6a5 NP_001139485 R.norvegicus Slc6a5 171148   NP_976079 98
H.sapiens SLC6A5 9152 Gene Info NP_004202 94
D.melanogaster CG5549 37772   NP_611836 51
A.gambiae AgaP_AGAP010481 1272609   XP_311463 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)