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Gene Info

Gene Information For:Mm. Atp6v0b, ATPase, H+ transporting, lysosomal V0 subunit B
Sequence ID:NM_033617
Entrez Gene ID:114143
Ensembl ID:ENSMUSG00000033379

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 117884330 - 117887288

NM_033617 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1312117556934117557245
313503117557708117557898
504555117558233117558284
556625117558408117558477
626703117558672117558749
704787117558880117558963
788836117559194117559242
837996117559774117559933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2812497Full LengthBC009169ATPase, H+ transporting, lysosomal V0 subunit B
4922226Full LengthBC030393ATPase, H+ transporting, lysosomal V0 subunit B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_291095  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033617 NP_291095 Q91V37
Q3U889
ATP-synt_C

Related Sequences

 
mRNAGenPeptSwissProt
BC009169 AAH09169 Q91VS4
BC030393 AAH30393 Q8JZR5
AF356006 AAL02096 Q91V37
Q3U889
AB060654 BAB61954 Q91V37
Q3U889
AK151847 BAE30738 Q91V37
Q3U889
AK152330 BAE31129 Q91V37
Q3U889
AK152823 BAE31524 Q91V37
Q3U889

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6v0b NP_291095 R.norvegicus Atp6v0b 298451   NP_001100151 97
H.sapiens ATP6V0B 533 Gene Info NP_004038 96
A.gambiae AgaP_AGAP009334 1271245   XP_310004 66
C.elegans vha-4 174272   NP_495659 65
D.melanogaster VhaPPA1-1 45247   NP_652010 64
N.crassa NCU09747 3880589   XP_964449 59
A.thaliana AT4G32530 829388   NP_001119099 57
A.thaliana AT2G25610 817101   NP_180132 57
S.cerevisiae VMA16 856421   NP_011891 57
S.pombe vma16 2541999   NP_594516 56
P.falciparum MAL13P1.271 813833   XP_001350256 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)