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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Far1, fatty acyl CoA reductase 1
Sequence ID:NM_026143
NM_027379
Entrez Gene ID:67420
Ensembl ID:ENSMUSG00000030759

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F2

Chromosomal Position (from UCSC)

Chromosomal Position:7: 113513860 - 113568382

 Exon Info From UCSC:
NM_026143
NM_027379

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3495305Full LengthBC007178fatty acyl CoA reductase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080419  NP_081655  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_026143 NP_080419 Q922J9 EC 1.2.1.n2 NAD_binding_4
NM_027379 NP_081655 Q922J9 EC 1.2.1.n2 Sterile
NAD_binding_4

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC007178 AAH07178 Q922J9 EC 1.2.1.n2
AK005531 BAB24102 Q922J9 EC 1.2.1.n2
AK011187 BAB27453 Q922J9 EC 1.2.1.n2
AK014486 BAB29388 Q922J9 EC 1.2.1.n2
AK030067 BAC26766 Q922J9 EC 1.2.1.n2
AK033674 BAC28423 Q922J9 EC 1.2.1.n2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Far1 NP_080419 H.sapiens FAR1 84188 Gene Info NP_115604 98
R.norvegicus Far1 293173   NP_001011933 93
A.gambiae AgaP_AGAP011736 1280904   XP_320774 37
D.melanogaster CG1443 43420   NP_651652 35
A.thaliana MS2 820372   NP_187805 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)