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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hepacam2, HEPACAM family member 2
Sequence ID:NM_178899
Entrez Gene ID:101202

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 A1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 3457088 - 3494498

NM_178899 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
182834070883407915
82993834132603413369
939101234161233416196
1013105034173883417425
1051107534175133417537
1076120134176233417748
1202149834259083426204
1499178334332893433573
1784213734369223437275
2138223634443993444497

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4483627Full LengthBC096374HEPACAM family member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_849230  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178899 NP_849230 Q4VAH7 ig
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC096374 AAH96374 Q4VAH7
AK033728 BAC28450 Q4VAH7
AK050501 BAC34294 Q4VAH7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hepacam2 NP_849230 R.norvegicus Hepacam2 296846   NP_001100050 93
H.sapiens HEPACAM2 253012 Gene Info NP_001034461 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)