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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Coq7, demethyl-Q 7
Sequence ID:NM_009940
Entrez Gene ID:12850
Ensembl ID:ENSMUSG00000030652

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F2|7 53.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 118525172 - 118529740

NM_009940 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1233125668575125668807
234302125669337125669405
303442125670850125670989
443557125671817125671931
558736125673072125673250
737871125676692125676826

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1380996Full LengthBC038681demethyl-Q 7
5376178IncompleteBC028276demethyl-Q 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034070  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009940 NP_034070 P97478 COQ7

Related Sequences

 
mRNAGenPeptSwissProt
AF080580 AAC31572 P97478
U81277 AAC53055 P97478
AF053770 AAC69179 P97478
AF098949 AAD43649 P97478
BC028276 AAH28276 Q8K359
BC038681 AAH38681 P97478
AK158380 BAE34481 Q3TYT1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Coq7 NP_034070 R.norvegicus Coq7 25249   NP_036917 96
H.sapiens COQ7 10229 Gene Info NP_057222 86
D.melanogaster COQ7 44007   NP_651967 59
C.elegans clk-1 175729   NP_498128 58
S.pombe coq7 2541024   NP_595416 54
N.crassa NCU03957 3873686   XP_957596 50
S.cerevisiae CAT5 854292   NP_014768 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)