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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Foxs1, forkhead box S1
Sequence ID:NM_010226
Entrez Gene ID:14239
Ensembl ID:ENSMUSG00000074676

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 H2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 152931897 - 152933208

NM_010226 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11311152757633152758943

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5372625Full LengthBC096604forkhead box S1
40130214Full LengthBC131937forkhead box S1
40130216Full LengthBC131939forkhead box S1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034356  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010226 NP_034356 Q4VA05
Q61574
Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
BC096604 AAH96604 Q4VA05
Q61574
BC131937 AAI31938 Q4VA05
BC131939 AAI31940 Q4VA05
AK077935 BAC37074 Q4VA05
Q61574
AK152669 BAE31404 Q4VA05
Q61574

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Foxs1 NP_034356 R.norvegicus Foxs1 311547   NP_001012091 92
H.sapiens FOXS1 2307 Gene Info NP_004109 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)