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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Abi1, abl-interactor 1
Sequence ID:NM_001077190
NM_001077192
NM_001077193
NM_007380
NM_145994
Entrez Gene ID:11308
Ensembl ID:ENSMUSG00000058835

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2 15.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 22941871 - 23040177

 Exon Info From UCSC:
NM_001077190
NM_001077192
NM_001077193
NM_007380
NM_145994

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498068Full LengthBC004657abl-interactor 1
6816252Full LengthBC079642abl-interactor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031406  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077190 NP_001070658 Q8CBW3  
NM_001077192 NP_001070660    
NM_001077193 NP_001070661    
NM_007380 NP_031406   SH3_1
SH3_2
Abi_HHR
NM_145994 NP_666106    

Related Sequences

 
mRNAGenPeptSwissProt
U17698 AAB00373 Q8CBW3
BC004657 AAH04657 Q8CBW3
BC079642 AAH79642 Q6AXD3
AY033645 AAK59381 Q8CBW3
Q3TPY5
AF420251 AAL16036 Q3TJR5
Q8CBW3
AK034476 BAC28722 Q8CBW3
AK151026 BAE30044 Q8CBW3
AK151363 BAE30338 Q3UAH6
AK152061 BAE30917 Q8CBW3
AK152184 BAE31015 Q8CBW3
AK153130 BAE31743 Q3TPY5
AK164040 BAE37600 Q3TPY5
AK165924 BAE38462 Q3TMI0
AK167328 BAE39430 Q3TJR5
AK167568 BAE39631 Q3TJ64
AK167744 BAE39781 Q3TPY5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abi1 NP_001070658 R.norvegicus Abi1 79249   NP_077373 100
H.sapiens ABI1 10006 Gene Info NP_005461 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)