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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atp13a2, ATPase type 13A2
Sequence ID:NM_001164366
NM_029097
Entrez Gene ID:74772
Ensembl ID:ENSMUSG00000036622

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 141002463 - 141007329

 Exon Info From UCSC:
NM_001164366
NM_029097

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4192094Full LengthBC042661ATPase type 13A2
5353766Full LengthBC023746ATPase type 13A2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083373  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164366 NP_001157838    
NM_029097 NP_083373 Q9CTG6 E1-E2_ATPase
Hydrolase

Related Sequences

 
mRNAGenPeptSwissProt
BC023746 AAH23746 Q8CIJ9
BC042661 AAH42661 Q9CTG6
AK003623 BAB22896 Q9CTG6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp13a2 NP_083373 R.norvegicus Atp13a2 362645   XP_342963 94
H.sapiens ATP13A2 23400 Gene Info NP_071372 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)