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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc5a6, solute carrier family 5 (sodium-dependent vitamin transporter), member 6
Sequence ID:NM_001177621
NM_001177622
NM_177870
Entrez Gene ID:330064
Ensembl ID:ENSMUSG00000006641

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 31036035 - 31048249

 Exon Info From UCSC:
NM_001177621
NM_001177622
NM_177870

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6416422Full LengthBC085132solute carrier family 5 (sodium-dependent vitamin transporter), member 6
40094012Full LengthBC117852solute carrier family 5 (sodium-dependent vitamin transporter), member 6
40094013Full LengthBC117853solute carrier family 5 (sodium-dependent vitamin transporter), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808538  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177621 NP_001171092    
NM_001177622 NP_001171093    
NM_177870 NP_808538 Q5U4D8 SSF

Related Sequences

 
mRNAGenPeptSwissProt
BC085132 AAH85132 Q5U4D8
BC117852 AAI17853 Q5U4D8
BC117853 AAI17854 Q5U4D8
AY572835 AAS79366 Q5U4D8
AK088682 BAC40502 Q5U4D8
AK158896 BAE34718 Q3TY45
AK161633 BAE36503 Q5U4D8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc5a6 NP_808538 R.norvegicus Slc5a6 170551   NP_570102 94
H.sapiens SLC5A6 8884 Gene Info NP_066918 83
A.gambiae AgaP_AGAP004199 1274035   XP_313095 42
D.melanogaster CG10444 37294   NP_611465 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)