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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc5a6, solute carrier family 5 (sodium-dependent vitamin transporter), member 6
Sequence ID:NM_001177621
Entrez Gene ID:330064
Ensembl ID:ENSMUSG00000006641

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 31036035 - 31048249

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6416422Full LengthBC085132solute carrier family 5 (sodium-dependent vitamin transporter), member 6
40094012Full LengthBC117852solute carrier family 5 (sodium-dependent vitamin transporter), member 6
40094013Full LengthBC117853solute carrier family 5 (sodium-dependent vitamin transporter), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808538  

Protein Infomation

NM_001177621 NP_001171092    
NM_001177622 NP_001171093    
NM_177870 NP_808538 Q5U4D8 SSF

Related Sequences

BC085132 AAH85132 Q5U4D8
BC117852 AAI17853 Q5U4D8
BC117853 AAI17854 Q5U4D8
AY572835 AAS79366 Q5U4D8
AK088682 BAC40502 Q5U4D8
AK158896 BAE34718 Q3TY45
AK161633 BAE36503 Q5U4D8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Slc5a6 NP_808538 R.norvegicus Slc5a6 170551   NP_570102 94
H.sapiens SLC5A6 8884 Gene Info NP_066918 83
A.gambiae AgaP_AGAP004199 1274035   XP_313095 42
D.melanogaster CG10444 37294   NP_611465 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)