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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hdac3, histone deacetylase 3
Sequence ID:NM_010411
Entrez Gene ID:15183
Ensembl ID:ENSMUSG00000024454

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B3|18 17.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 37936978 - 37954928

 Exon Info From UCSC:
NM_010411

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862322Full LengthBC139300histone deacetylase 3
8862323Full LengthBC139301histone deacetylase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034541  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010411 NP_034541   Hist_deacetyl

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF074881 AAC36305 O88895 EC 3.5.1.98
AF074882 AAC36306 O88895 EC 3.5.1.98
AF098295 AAF28798 Q9JM08  
AF125536 AAF36425 Q9JLX5  
BC139300 AAI39301 Q3UM33  
BC139301 AAI39302 Q3UM33  
JN651901 AEY82388 H6UK59  
JN651902 AEY82389 H6UK60  
JN651903 AEY82390 G3X9M4  
JN651904 AEY82391 H6UK62  
AK145158 BAE26265 Q3UM33  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hdac3 NP_034541 H.sapiens HDAC3 8841 Gene Info NP_003874 100
R.norvegicus Hdac3 84578   NP_445900 100
D.melanogaster Hdac3 44446   NP_651978 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)