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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lin7b, lin-7 homolog B (C. elegans)
Sequence ID:NM_011698
Entrez Gene ID:22342
Ensembl ID:ENSMUSG00000003872

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 B2

Chromosomal Position (from UCSC)

Chromosomal Position:7: 45367900 - 45370566

NM_011698 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
311385262326052623367
1393025262367352623836
3035125262451052624719
5135845262528452625355
5857035262549652625614
7047465262589152625933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4164883Full LengthBC031780lin-7 homolog B (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035828  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011698 NP_035828 O88951 PDZ
L27

Related Sequences

 
mRNAGenPeptSwissProt
AF087694 AAC78482 O88951
AF173082 AAD48501 O88951
BC031780 AAH31780 O88951

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lin7b NP_035828 R.norvegicus Lin7b 60377   NP_068526 100
H.sapiens LIN7B 64130 Gene Info NP_071448 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)