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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r51, vomeronasal 1 receptor 51
Sequence ID:NM_011683
Entrez Gene ID:22296
Ensembl ID:ENSMUSG00000062818

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 90122642 - 90130338

NM_011683 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1309007263690072665
311399007465090074758
14023599007841990080638

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6306893Full LengthBC046308vomeronasal 1 receptor, A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035813  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011683 NP_035813   V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC046308 AAH46308 Q78GE8
Y12725 CAA73257 Q8VIC6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r51 NP_035813 M.musculus Vmn1r45 22297 Gene Info NP_035814 85
M.musculus Vmn1r42 113848 Gene Info NP_444451 84
M.musculus Vmn1r48 113845 Gene Info NP_444448 82
M.musculus Vmn1r43 113847 Gene Info NP_444450 82
M.musculus Vmn1r47 113846 Gene Info NP_444449 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)