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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rgr, retinal G protein coupled receptor
Sequence ID:NM_021340
Entrez Gene ID:57811
Ensembl ID:ENSMUSG00000021804

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 B|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 37037625 - 37048934

NM_021340 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18783785067537851552
8799923785204037852153
99311103785575837855875
111112643785776137857914
126513863785889037859011
138715433786002637860182
154416593786203437862149

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733804Full LengthBC119055retinal G protein coupled receptor
30685996IncompleteBC082611retinal G protein coupled receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067315  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021340 NP_067315 Q543X1
Q9Z2B3
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF076930 AAC69836 Q543X1
Q9Z2B3
BC119055 AAI19056 Q543X1
AK044450 BAC31926 Q543X1
Q9Z2B3
AK044649 BAC32017 Q543X1
Q9Z2B3
AK149272 BAE28782 Q3UEX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rgr NP_067315 R.norvegicus Rgr 306307   NP_001100769 95
H.sapiens RGR 5995 Gene Info NP_001012738 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)