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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chrd, chordin
Sequence ID:NM_009893
Entrez Gene ID:12667
Ensembl ID:ENSMUSG00000006958

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B1|16 14.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 20733126 - 20742382

 Exon Info From UCSC:
NM_009893

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130999Full LengthBC145696chordin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034023  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009893 NP_034023 Q9Z0E2 VWC
CHRD

Related Sequences

 
mRNAGenPeptSwissProt
AF069501 AAC68867 Q9Z0E2
AF096276 AAD19895 Q9Z0E2
BC145696 AAI45697 A6H5Z6
AK220310 BAD90387 Q5DU60
AK149445 BAE28881 Q3UEN0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chrd NP_034023 R.norvegicus Chrd 117275   NP_476475 97
H.sapiens CHRD 8646 Gene Info NP_003732 87
A.gambiae AgaP_AGAP000472 1271767   XP_310620 34
D.melanogaster sog 32498   NP_476736 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)