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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tspyl1, testis-specific protein, Y-encoded-like 1
Sequence ID:NM_009433
Entrez Gene ID:22110
Ensembl ID:ENSMUSG00000047514

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 34282225 - 34283680

NM_009433 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126963400199534004690

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4196841Full LengthBC011213testis-specific protein, Y-encoded-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033459  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009433 NP_033459 O88852 NAP

Related Sequences

 
mRNAGenPeptSwissProt
AF042180 AAC62383 O88852
BC011213 AAH11213 O88852
AK053812 BAC35536 O88852
AK159432 BAE35079 O88852
AK166805 BAE39033 O88852
AK166893 BAE39098 O88852

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tspyl1 NP_033459 R.norvegicus Tspyl1 29544   NP_001013051 89
H.sapiens TSPYL1 7259 Gene Info NP_003300 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)