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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifit2, interferon-induced protein with tetratricopeptide repeats 2
Sequence ID:NM_008332
Entrez Gene ID:15958
Ensembl ID:ENSMUSG00000045932

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C1|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 34550942 - 34576419

NM_008332 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13293462518334625511
3304813464470834644859
48239493464755634651023

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6513417Full LengthBC050835interferon-induced protein with tetratricopeptide repeats 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032358  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008332 NP_032358 Q6GTM0 TPR_1

Related Sequences

 
mRNAGenPeptSwissProt
U43085 AAC52626 Q6GTM0
Q64112
BC050835 AAH50835 Q6GTM0
AK038027 BAC29924 Q6GTM0
AK042366 BAC31239 Q8C9D5
AK150206 BAE29377 Q6GTM0
AK150253 BAE29415 Q6GTM0
CT010395 CAJ18602 Q6GTM0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifit2 NP_032358 R.norvegicus Ifit2 294091   NP_001019924 79
H.sapiens IFIT2 3433 Gene Info NP_001538 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)