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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cyb5b, cytochrome b5 type B
Sequence ID:NM_025558
Entrez Gene ID:66427
Ensembl ID:ENSMUSG00000031924

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 D2

Chromosomal Position (from UCSC)

Chromosomal Position:8: 107150659 - 107184100

NM_025558 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1213109674560109674772
214342109693710109693838
343372109694290109694319
373401109703313109703341
4024294109707477109711369

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6410090Full LengthBC054749cytochrome b5 type B
6530835Full LengthBC058812cytochrome b5 type B
6842939Full LengthBC062980cytochrome b5 type B
5364383IncompleteBC046479cytochrome b5 type B
5697793IncompleteBC046810cytochrome b5 type B
5704919IncompleteBC048147cytochrome b5 type B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079834  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025558 NP_079834 Q9CQX2 Cyt-b5

Related Sequences

 
mRNAGenPeptSwissProt
BC054749 AAH54749 Q9CQX2
BC058812 AAH58812 Q9CQX2
BC062980 AAH62980 Q9CQX2
AK003333 BAB22721 Q9CQX2
AK003815 BAB23012 Q9CQX2
AK007780 BAB25251 Q9CQX2
AK019263 BAB31635 Q9CQX2
AK052810 BAC35156 Q9CQX2
AK088970 BAC40677 Q9CQX2
AK165543 BAE38245 Q3TN44
AK166544 BAE38844 Q3TLE8
AK168422 BAE40334 Q3TH64

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cyb5b NP_079834 R.norvegicus Cyb5b 80773   NP_085075 92
H.sapiens CYB5B 80777 Gene Info NP_085056 75
S.pombe oca8 2538772   NP_587997 54
N.crassa NCU03910 3873703   XP_957549 50
A.thaliana CB5-D 834939   NP_199692 46
S.cerevisiae CYB5 855612   NP_014288 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)