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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kpna6, karyopherin (importin) alpha 6
Sequence ID:NM_008468
Entrez Gene ID:16650
Ensembl ID:ENSMUSG00000003731

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4|4 D2.3

Chromosomal Position (from UCSC)

Chromosomal Position:4: 129647991 - 129661434

 Exon Info From UCSC:
NM_008468

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2651272Full LengthBC004833karyopherin (importin) alpha 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032494  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008468 NP_032494 O35345
Q4FJZ2
Arm
IBB

Related Sequences

 
mRNAGenPeptSwissProt
AF020773 AAC53373 O35345
Q4FJZ2
BC004833 AAH04833 O35345
Q4FJZ2
AK007053 BAB24841 O35345
AK046371 BAC32694 Q8BH30
AK084212 BAC39138 Q8BH30
AK154882 BAE32900 O35345
CT010260 CAJ18468 O35345
Q4FJZ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kpna6 NP_032494 R.norvegicus Kpna6 362607   NP_001015029 99
H.sapiens KPNA6 23633 Gene Info NP_036448 99
D.melanogaster Kap-alpha1 40160   NP_524167 66
A.gambiae AgaP_AGAP005401 1276102   XP_315411 66
N.crassa NCU01249 3876800   XP_960652 60
A.thaliana IMPA-2 827302   NP_001154239 57
A.thaliana IMPA-1 819857   NP_187328 57
S.pombe cut15 2539426   NP_587868 55
S.cerevisiae SRP1 855532   NP_014210 55
P.falciparum PF08_0087 2655286   XP_001349401 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)