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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aqp6, aquaporin 6
Sequence ID:NM_175087
Entrez Gene ID:11831
Ensembl ID:ENSMUSG00000043144

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15 56.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 99601399 - 99605477

NM_175087 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14019943183099432230
4025609943301999433177
5616419943339999433479
6428279943412699434311
82820609943467599435907

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40102369Full LengthBC115586aquaporin 6
40102370IncompleteBC115587aquaporin 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780296  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175087 NP_780296 Q8C4A0 MIP

Related Sequences

 
mRNAGenPeptSwissProt
BC115586 AAI15587 Q14BV5
BC115587 AAI15588 A4FUR0
DQ464060 ABE96960 Q14BV5
DQ826418 ABH01263 Q14BV5
AK082699 BAC38576 Q8C4A0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aqp6 NP_780296 R.norvegicus Aqp6 29170   NP_071517 97
H.sapiens AQP6 363 Gene Info NP_001643 78
A.thaliana TIP4;1 817123   NP_180152 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)