Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sec61b, Sec61 beta subunit
Sequence ID:NM_024171
Entrez Gene ID:66212
Ensembl ID:ENSMUSG00000053317

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 B1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 47474660 - 47483233

NM_024171 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1934748753247487624
941914748778347487880
1922934749300247493103
2945524749584647496104

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487410Full LengthBC002089Sec61 beta subunit
6412192Full LengthBC081445Sec61 beta subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077133  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024171 NP_077133 Q9CQS8 Sec61_beta

Related Sequences

 
mRNAGenPeptSwissProt
BC002089 AAH02089 Q9CQS8
BC081445 AAH81445 Q9CQS8
AK004505 BAB23338 Q9CQS8
AK008739 BAB25868 Q9CQS8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sec61b NP_077133 H.sapiens SEC61B 10952 Gene Info NP_006799 99
R.norvegicus Sec61b 298068   NP_001100124 98
D.melanogaster Sec61beta 46080   NP_652037 71
A.gambiae AgaP_AGAP011504 1278377   XP_317795 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)