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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cbfb, core binding factor beta
Sequence ID:NM_001161456
NM_001161457
NM_001161458
NM_022309
Entrez Gene ID:12400
Ensembl ID:ENSMUSG00000031885

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, pooled tissue, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 105170673 - 105217986

 Exon Info From UCSC:
NM_001161456
NM_001161457
NM_001161458
NM_022309

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3481800Full LengthBC006763core binding factor beta
4016060Full LengthBC026749core binding factor beta
4016060Full LengthBC040752core binding factor beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071704  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161456 NP_001154928    
NM_001161457 NP_001154929    
NM_001161458 NP_001154930    
NM_022309 NP_071704 Q08024 CBF_beta

Related Sequences

 
mRNAGenPeptSwissProt
BC006763 AAH06763 Q08024
BC026749 AAH26749 Q08024
BC040752 AAH40752 Q08024
D14570 BAA03424 Q08024
D14571 BAA03425 Q08024
D14572 BAA03426 Q08024
AK089094 BAC40748 Q08024
AK134449 BAE22149 Q3UYR3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cbfb NP_071704 H.sapiens CBFB 865 Gene Info NP_074036 99
R.norvegicus Cbfb 361391   NP_001013209 98
D.melanogaster Bgb 38198   NP_477065 54
A.gambiae AgaP_AGAP000317 1271945   XP_310806 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)