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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pafah1b2, platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
Sequence ID:NM_008775
Entrez Gene ID:18475
Ensembl ID:ENSMUSG00000003131

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.2|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 45983844 - 45984835

NM_008775 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3486003Full LengthBC002037platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit
30012448Full LengthBC056211platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit

Protein Infomation

NM_008775 NP_032801    

Related Sequences

U57747 AAC52997 Q61206 EC
BC002037 AAH02037 Q61206 EC
BC056211 AAH56211 Q61206 EC
AK011326 BAB27547 Q9CT35  
AK012116 BAC25355 Q8BTA2  
AK153424 BAE31983 Q61206 EC
XM_001478675 XP_001478725    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Pafah1b2 NP_032801 H.sapiens PAFAH1B2 5049 Gene Info NP_002563 100
R.norvegicus Pafah1b2 64189   NP_071782 100
D.melanogaster Paf-AHalpha 32529   NP_525089 48
A.gambiae AgaP_AGAP000939 1270425   XP_309124 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)