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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tgfbr3, transforming growth factor, beta receptor III
Sequence ID:NM_011578
Entrez Gene ID:21814
Ensembl ID:ENSMUSG00000029287

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E5|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 107108465 - 107289381

 Exon Info From UCSC:
NM_011578

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6410554Full LengthBC070428transforming growth factor, beta receptor III

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035708  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011578 NP_035708   Zona_pellucida

Related Sequences

 
mRNAGenPeptSwissProt
AF039601 AAC28564 O88393
BC070428 AAH70428 O88393
AK166082 BAE38560 Q3TM82

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tgfbr3 NP_035708 R.norvegicus Tgfbr3 29610   NP_058952 95
H.sapiens TGFBR3 7049 Gene Info NP_003234 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta