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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bbs4, Bardet-Biedl syndrome 4 (human)
Sequence ID:NM_175325
Entrez Gene ID:102774
Ensembl ID:ENSMUSG00000025235

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 B|9 33.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 59322889 - 59353456

 Exon Info From UCSC:
NM_175325

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40131074Full LengthBC145771Bardet-Biedl syndrome 4 (human)
40131076Full LengthBC145773Bardet-Biedl syndrome 4 (human)
6413148IncompleteBC055797Bardet-Biedl syndrome 4 (human)
30246877IncompleteBC092531Bardet-Biedl syndrome 4 (human)
30249410IncompleteBC089507Bardet-Biedl syndrome 4 (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780534  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175325 NP_780534 Q8C1Z7 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
BC055797 AAH55797 Q8C1Z7
BC089507 AAH89507 Q8C1Z7
BC092531 AAH92531 Q8C1Z7
BC145771 AAI45772 A6H669
BC145773 AAI45774 A6H669
AK039560 BAC30384 Q8C1Z7
AK089970 BAC41021 Q8C1Z7
AK134734 BAE22262 Q8C1Z7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bbs4 NP_780534 R.norvegicus Bbs4 300754   NP_001100296 97
H.sapiens BBS4 585 Gene Info NP_149017 90
A.gambiae AgaP_AGAP004828 1275136   XP_314365 39
C.elegans F58A4.14 3565681   NP_001022625 36
D.melanogaster BBS4 36167   NP_610636 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)