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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clu, clusterin
Sequence ID:NM_013492
Entrez Gene ID:12759
Ensembl ID:ENSMUSG00000022037

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D1|14 28.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 65968638 - 65981543

NM_013492 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12066658731966587524
2073276659056866590688
3284766659216166592309
4776476659367966593849
64810596659441766594828
106011646659574266595846
116513946659848766598716
139515706659969066599865
157118086660014466600381

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30550773Full LengthBC075668clusterin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038520  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013492 NP_038520 Q06890 Clusterin

Related Sequences

 
mRNAGenPeptSwissProt
L05670 AAA37284 Q06890
L08235 AAA37422 Q549A5
Q06890
S70244 AAB30623 Q06890
AF248057 AAF67184 Q549A5
Q06890
AF248058 AAF67185 Q9JK98
BC075668 AAH75668 Q549A5
Q06890
D14077 BAA03162 Q549A5
Q06890
AK132030 BAE20954 Q3V245

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clu NP_038520 R.norvegicus Clu 24854   NP_444180 93
H.sapiens CLU 1191 Gene Info NP_976084 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)