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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prol1, proline rich, lacrimal 1
Sequence ID:NM_008644
Entrez Gene ID:17830
Ensembl ID:ENSMUSG00000064156

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 88317320 - 88328813

NM_008644 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1868874633688746421
871558874756988747637
15611668875683188757841

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4166946Full LengthBC021401mucin 10, submandibular gland salivary mucin
4924369Full LengthBC042902mucin 10, submandibular gland salivary mucin
4191854IncompleteBC021158mucin 10, submandibular gland salivary mucin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008644 NP_032670 Q61002  

Related Sequences

 
mRNAGenPeptSwissProt
U37531 AAA80541 Q61002
AF247816 AAG44545 Q9EQG0
BC021401 AAH21401 Q8VC95
BC042902 AAH42902 Q80XS5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prol1 NP_032670 R.norvegicus Prol1 65182   NP_598197 59
D.melanogaster Muc26B 50424   NP_652552 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)